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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925278.1_cds_XP_016473535.1_65654
CDS Infomation

[gene=LOC107795413] [db_xref=GeneID:107795413] [protein=probable auxin efflux carrier component 1b] [protein_id=XP_016473535.1] [location=complement(join(111658..111724,112010..112086,112166..112323,112413..112498,112646..112916,113546..114665))] [gbkey=CDS]
Sequence

ATGATCTCACTTTCAGACCTTTACCATGTTCTCACAGCTGTAGTACCACTCTATGTAGCC
ATGATATTGGCTTATGGTTCAGTAAAATGGTGGAAAATTTTCAGCCCAGATCAATGTTCA
GGAATTAACAGATTTGTGGCTCTTTTTGCAGTTCCATTGCTATCTTTTCACTTCATTGCA
TCCAACAATCCTTATGCCATGAACTACAAGTTCATAGCTGCTGACACTTTGCAAAAAGTC
ATAGTTCTTGTTGTTTTAGCCATTTGGTCAAGAATCAGCTCAAGGGGTTCCCTTGAGTGG
TCCATTACTTTGTTTTCTCTTTCCACTTTACCAAACACTTTAGTTATGGGAATCCCTTTG
TTAAAGGGTATGTATGGTGATGCCTCAGGAAGTTTAATGGTTCAAATTGTTGTCCTTCAA
TGTATCATTTGGTATACTTTGATGCTTTTCTTGTTTGAGTATAGAGGTGCTAGAATGCTT
ATTGCTGAGCAGTTTCCTGATACTGCAGGGGATATTATTTCCTTTAAAATTGACTCTGAT
GTTATGTCATTAGATGGAAAAGAACCATTGGAAACTCAAGCTGAAGTTGGTGAAGATGGT
AAACTTCATGTAACTGTGAGAAAATCTACAAGTTCAAGGTCTGAAGTTTTTTCAAGAATG
TCACATGGACTTAACAGTGGTGTTTCATTAACCCCTAGACCATCAAACTTGTCAAATGCT
GAGATTTACTCTTTACAATCTTCAAGAAATCCTACTCCTAGAGGTTCAAGCTTTAACCAC
ACTGATTTGTACTCAATGGTGAATGGGAAAAGTGCAAATATGAGTCCTAGGACATCAAAT
TTTGGCAACATGGGATTTGATGAGGAGAGTGGATTTGGTGGGAGGGGAAATGGGGTTTAT
GGACAGGGGAATGTGGGGTACCCTGCACCTGCTAGTGCTGGAATATTTTCACCTGCTACT
GGACCAGGGGCCAAGAAAAAAGCTAATGGAACTGAGGGTGGTAAAGATCTTCACATGTTT
GTTTGGAGTTCAAATGCTTCACCAGCTTCTGAAGGTGGGATTCATGTTTTCAGAGGAGGA
GAATATGGTAATGACCTTGGTGTTGGAGCTCACCCAAAAGATTATGATGATTTTGGCCGA
GATGAGTTCACTTCCGGGAATAAGAAGAACCCTAATGGATGTGATCGAGAAGGACCGGTG
CTAAAAAAGCTCGGCTCAAGCTCTACGGTTGAGCTGTTTCCCAAGACTGCTAATGAAACT
AAGGCTACTGCTATGCCTCCTGCCAGTGTTATGACCAGACTTATTCTGATTATGGTCTGG
CGAAAACTTGTTAGGAACCCAAATACTTATTCCAGTCTCATTGGCCTCACTTGGTCGTTG
GTCTCATTCAGGTGGAATGTTGAGATGCCTGTGATTATAGCCAAATCAATATCTATTCTT
TCTGATGCTGGTCTTGGAATGGCAATGTTTAGTCTTGGTTTATTCATGGCATTGCAGCCT
AGAATGATTGCCTGTGGAAAAACAATTGCTTCCTTCTCTATGGCAGTGAGATTCATCACT
GGTCCAGCAGTCATGGCCGCAGCCTCCATCGCTGTTGGACTTCGAGGCGTTCTTTTGCAC
ATTGCAATAGTTCAGGCAGCTCTACCTCAAGGGATTGTTCCTTTTGTCTTTGCAAAAGAA
TACAATGTTCATCCCGATATACTGAGCACAGGGGTTATATTTGGGATGTTAATAGCCCTT
CCAATCACTCTGGTCTACTATATTTTGCTGGGGCTTTGA

Peptide Sequence

PEP ID

XP_016473535.1
PEP Infomation

PREDICTED: probable auxin efflux carrier component 1b [Nicotiana tabacum]
Sequence

MISLSDLYHVLTAVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIA
SNNPYAMNYKFIAADTLQKVIVLVVLAIWSRISSRGSLEWSITLFSLSTLPNTLVMGIPL
LKGMYGDASGSLMVQIVVLQCIIWYTLMLFLFEYRGARMLIAEQFPDTAGDIISFKIDSD
VMSLDGKEPLETQAEVGEDGKLHVTVRKSTSSRSEVFSRMSHGLNSGVSLTPRPSNLSNA
EIYSLQSSRNPTPRGSSFNHTDLYSMVNGKSANMSPRTSNFGNMGFDEESGFGGRGNGVY
GQGNVGYPAPASAGIFSPATGPGAKKKANGTEGGKDLHMFVWSSNASPASEGGIHVFRGG
EYGNDLGVGAHPKDYDDFGRDEFTSGNKKNPNGCDREGPVLKKLGSSSTVELFPKTANET
KATAMPPASVMTRLILIMVWRKLVRNPNTYSSLIGLTWSLVSFRWNVEMPVIIAKSISIL
SDAGLGMAMFSLGLFMALQPRMIACGKTIASFSMAVRFITGPAVMAAASIAVGLRGVLLH
IAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL

Transcript Sequence

Gene sequence data has not been registered.